BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B07LP1|AL430003
(547 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 674 0.0
>3x_Contig1789
Length = 30977
Score = 674 bits (328), Expect = 0.0
Identities = 459/507 (90%), Gaps = 12/507 (2%)
Strand = Plus / Plus
Query: 41 attaagccactaacttttgaaaaaaraactgcaacattaagccamcgamwcgtttatggg 100
|||||||||| ||||||| |||||| |||| ||||||||||||| ||| ||||||||||
Sbjct: 9813 attaagccac-aactttt-aaaaaaaaactacaacattaagccaccgaaacgtttatggg 9870
Query: 101 ttwrcatcttttttcattatatwttgcattcmwatwttttgttgtygctcgttattwtac 160
|| |||||||||||||||| | |||||||| || | ||||||| |||||||||| |||
Sbjct: 9871 ttaacatcttttttcattat-tattgcattcaaatatattgttgtcgctcgttattatac 9929
Query: 161 matwtacaatrarttywttctattcactcatttaaattatttttttwttagctttgctcc 220
|| |||||| | || ||| |||||||||||||||||||||| || | |||||| | ||
Sbjct: 9930 aatatacaataaattcattcaattcactcatttaaattattttattataagctttac-cc 9988
Query: 221 tgtmcatctatcatmattatcatatwtataatttcaacttaacccttttcatttaagwac 280
||| | |||||||| |||||||||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 9989 tgtcc-tctatcataattatcatatatataattacaacttaacccttttcatttaagaac 10047
Query: 281 ccggtcttaatactatcaactccatgcmgctaattttcgttattatcccaaaatttaagc 340
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 10048 ccggtcttaatactatcaactccatgcagctaattttcgttattatcccaaaatttaagc 10107
Query: 341 tggatatatcartctctgggcaattacmaaactgcgcgtcggttaggaaccagatacttc 400
||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 10108 tggatatatcaatctctgggcaattacaaaact--ccgtcggttaggaaccagatacttc 10165
Query: 401 gttgtcatattgcttcccacattatgagcatacactatataragtatacacctgcataat 460
||||||| ||||||||||||||||| ||||||| ||||||| |||| ||||||| |||||
Sbjct: 10166 gttgtca-attgcttcccacattat-agcatac-ctatataaagta-acacctg-ataat 10220
Query: 461 ggcaataaaatataacaaagcaccataagttgaggcctaacgaggttaagaaaaaaattt 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10221 ggcaataaaatataacaaagcaccataagttgaggcctaacgaggttaagaaaaaaattt 10280
Query: 521 ctatgtaataatatamacatgttttgg 547
||||||||||||||| |||||||||||
Sbjct: 10281 ctatgtaataatatacacatgttttgg 10307
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2934
Number of Sequences: 1807
Number of extensions: 2934
Number of successful extensions: 74
Number of sequences better than 1.0e-20: 1
length of query: 547
length of database: 10,358,551
effective HSP length: 16
effective length of query: 531
effective length of database: 10,329,639
effective search space: 5485038309
effective search space used: 5485038309
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 48 (99.1 bits)